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Case study · Population genomics

Lifebit powers genomic analysis within Singapore’s TRUST platform

Within TRUST, Singapore’s national research data platform run with Synapxe, Lifebit provides the genomic data platform and low-code analysis tools. The data never leaves the source.

100,000 participants in PRECISE-SG100K, Singapore’s national genome study (Chinese, Malay, and Indian)
102,202 whole genomes delivered into TRUST by PRECISE-SG100K
36 PRECISE-SG100K research projects selected (8 Flagship, 28 Driver)
5 global pharma companies in the PRECISE-SG100K consortium, analyzing data inside TRUST
Synapxe customer story

01 · The challenge

Link genomes and health records under national rules

Singapore needed to let researchers and partners, including pharma, analyze genomic and linked health data at scale while meeting PDPA and Ministry of Health security rules.

National-scale genomic and health records data that cannot leave Singapore

PDPA and Ministry of Health security requirements

Many research groups and industry partners on one governed platform

02 · What we deployed

Genomic analysis inside a sovereign national platform

Lifebit’s genomic data platform runs within the Singapore government’s sovereign cloud as part of TRUST. Data, compute, and audit logs stay in Singapore, and Synapxe and the Ministry of Health run governance.

Sovereign by design

No path exists for patient-level data to leave Singapore.

Linked analysis

Genomic, clinical, registry, and longitudinal data are linked securely in one environment.

Governance stays local

Project approvals, accreditation, and audit trails are run by Synapxe and the Ministry of Health.

How it works

From connected data to approved results

1

Researchers apply through the TRUST portal; a national Data Access Committee reviews and approves every data request.

2

A trusted third party links and anonymizes datasets to Ministry of Health standards in a secure environment on Singapore’s Government Commercial Cloud.

3

Approved users analyze in air-gapped workspaces with R, Python, and Spark, and with Lifebit’s low-code tools for genomic and clinical data.

4

Results leave only through an export request reviewed in the portal; patient-level data stays in Singapore.

What’s in the stack

Lifebit Platform (genomic data platform, GDTSP) Singapore Government Commercial Cloud OMOP CDM (national mapping effort) Five Safes framework Jupyter, R, and Nextflow (Lifebit-reported) PRECISE-SG100K data releases (10K, 50K, 100K) linked to health records

Lifebit products used: Trusted Research Environment · Trusted Data Factory

03 · The results

Precision medicine for Asian populations

PRECISE-SG100K sequenced 102,202 whole genomes from Singaporeans of Chinese, Malay, and Indian ancestry. Each data release goes into TRUST, the Ministry of Health’s secure research platform, where it is linked to health records, and Lifebit provides the genomic analysis tools inside. Five global pharma companies (Alnylam, Bayer, Boehringer Ingelheim, Novo Nordisk, and GSK) have joined the PRECISE-SG100K research consortium and analyze the data through TRUST without downloading it. Lifebit opened a Singapore R&D center with Synapxe in February 2024.

~40 anonymized datasets available in TRUST as of August 2024 (TRUST-wide figure, not Lifebit-specific)
22 approved TRUST research use cases as of August 30, 2024 (TRUST-wide)
12 public research organizations with pre-agreed data access terms, as of April 22, 2024 (TRUST-wide)

Timeline

November 2022 TRUST became operational, jointly developed by the Ministry of Health, SNDGO, GovTech, and IHiS (now Synapxe).
February 2024 Lifebit opened its Singapore R&D center with Synapxe and said it was implementing its genomic analytics into TRUST; TRUST later listed Lifebit’s low- and no-code tools for its portal (Q4 2024).
July 2025 AWS, Lifebit, and Synapxe hosted a precision medicine forum in Singapore, with speakers from TRUST, PRECISE, and NUHS.
May 2026 GSK became the fifth pharma partner analyzing PRECISE-SG100K data through TRUST.

About this use case

Population genomics

National precision medicine links genomes with hospital, registry, and lifestyle records so researchers can study disease in a country’s own population, here Chinese, Malay, and Indian Singaporeans. Data access usually means many separate approvals and copies. A single governed platform gives one approval route, keeps data in Singapore, and returns only approved results.

Who uses it here: Researchers from Singapore’s public research organizations, with the National University of Singapore the largest group, plus approved industry partners.

See how population genomics works